
diff -r 6a7317665868 -r 33de88ae7b62 pnas/pnas.tex
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/pnas/pnas.tex	Sun Oct 24 22:03:42 2010 -0700
@@ -0,0 +1,252 @@
+%% PNAStmpl.tex
+%% Template file to use for PNAS articles prepared in LaTeX
+%% Version: Apr 14, 2008
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% BASIC CLASS FILE 
+%% PNAStwo for two column articles is called by default.
+%% Uncomment PNASone for single column articles. One column class
+%% and style files are available upon request from pnas@nas.edu.
+%% (uncomment means get rid of the '%' in front of the command)
+
+%\documentclass{pnasone}
+\documentclass{pnastwo}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Changing position of text on physical page:
+%% Since not all printers position
+%% the printed page in the same place on the physical page,
+%% you can change the position yourself here, if you need to:
+
+% \advance\voffset -.5in % Minus dimension will raise the printed page on the 
+                         %  physical page; positive dimension will lower it.
+
+%% You may set the dimension to the size that you need.
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% OPTIONAL GRAPHICS STYLE FILE
+
+%% Requires graphics style file (graphicx.sty), used for inserting
+%% .eps files into LaTeX articles.
+%% Note that inclusion of .eps files is for your reference only;
+%% when submitting to PNAS please submit figures separately.
+
+%% Type into the square brackets the name of the driver program 
+%% that you are using. If you don't know, try dvips, which is the
+%% most common PC driver, or textures for the Mac. These are the options:
+
+% [dvips], [xdvi], [dvipdf], [dvipdfm], [dvipdfmx], [pdftex], [dvipsone],
+% [dviwindo], [emtex], [dviwin], [pctexps], [pctexwin], [pctexhp], [pctex32],
+% [truetex], [tcidvi], [vtex], [oztex], [textures], [xetex]
+
+%\usepackage[dvips]{graphicx}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% OPTIONAL POSTSCRIPT FONT FILES
+
+%% PostScript font files: You may need to edit the PNASoneF.sty
+%% or PNAStwoF.sty file to make the font names match those on your system. 
+%% Alternatively, you can leave the font style file commands commented out
+%% and typeset your article using the default Computer Modern 
+%% fonts (recommended). If accepted, your article will be typeset
+%% at PNAS using PostScript fonts.
+
+
+% Choose PNASoneF for one column; PNAStwoF for two column:
+%\usepackage{PNASoneF}
+%\usepackage{PNAStwoF}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% ADDITIONAL OPTIONAL STYLE FILES
+
+%% The AMS math files are commonly used to gain access to useful features
+%% like extended math fonts and math commands.
+
+\usepackage{amssymb,amsfonts,amsmath}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% OPTIONAL MACRO FILES
+%% Insert self-defined macros here.
+%% \newcommand definitions are recommended; \def definitions are supported
+
+%\newcommand{\mfrac}[2]{\frac{\displaystyle #1}{\displaystyle #2}}
+%\def\s{\sigma}
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%% Don't type in anything in the following section:
+%%%%%%%%%%%%
+%% For PNAS Only:
+\contributor{Submitted to Proceedings
+of the National Academy of Sciences of the United States of America}
+\url{www.pnas.org/cgi/doi/10.1073/pnas.0709640104}
+\copyrightyear{2008}
+\issuedate{Issue Date}
+\volume{Volume}
+\issuenumber{Issue Number}
+%%%%%%%%%%%%
+
+\begin{document}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+
+%% For titles, only capitalize the first letter
+%% \title{Almost sharp fronts for the surface quasi-geostrophic equation}
+
+\title{The blob complex}
+
+
+%% Enter authors via the \author command.  
+%% Use \affil to define affiliations.
+%% (Leave no spaces between author name and \affil command)
+
+%% Note that the \thanks{} command has been disabled in favor of
+%% a generic, reserved space for PNAS publication footnotes.
+
+%% \author{<author name>
+%% \affil{<number>}{<Institution>}} One number for each institution.
+%% The same number should be used for authors that
+%% are affiliated with the same institution, after the first time
+%% only the number is needed, ie, \affil{number}{text}, \affil{number}{}
+%% Then, before last author ...
+%% \and
+%% \author{<author name>
+%% \affil{<number>}{}}
+
+%% For example, assuming Garcia and Sonnery are both affiliated with
+%% Universidad de Murcia:
+%% \author{Roberta Graff\affil{1}{University of Cambridge, Cambridge,
+%% United Kingdom},
+%% Javier de Ruiz Garcia\affil{2}{Universidad de Murcia, Bioquimica y Biologia
+%% Molecular, Murcia, Spain}, \and Franklin Sonnery\affil{2}{}}
+
+\author{Scott Morrison\affil{1}{Miller Institute for Basic Research, UC Berkeley, CA 94704, USA} \and Kevin Walker\affil{2}{Microsoft Station Q, 2243 CNSI Building, UC Santa Barbara, CA 93106, USA}}
+
+\contributor{Submitted to Proceedings of the National Academy of Sciences
+of the United States of America}
+
+%% The \maketitle command is necessary to build the title page.
+\maketitle
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{article}
+
+\begin{abstract} -- enter abstract text here -- \end{abstract}
+
+
+%% When adding keywords, separate each term with a straight line: |
+\keywords{term | term | term}
+
+%% Optional for entering abbreviations, separate the abbreviation from
+%% its definition with a comma, separate each pair with a semicolon:
+%% for example:
+%% \abbreviations{SAM, self-assembled monolayer; OTS,
+%% octadecyltrichlorosilane}
+
+% \abbreviations{}
+
+%% The first letter of the article should be drop cap: \dropcap{}
+%\dropcap{I}n this article we study the evolution of ''almost-sharp'' fronts
+
+%% Enter the text of your article beginning here and ending before
+%% \begin{acknowledgements}
+%% Section head commands for your reference:
+%% \section{}
+%% \subsection{}
+%% \subsubsection{}
+
+-- text of paper here --
+
+%% == end of paper:
+
+%% Optional Materials and Methods Section
+%% The Materials and Methods section header will be added automatically.
+
+%% Enter any subheads and the Materials and Methods text below.
+%\begin{materials}
+% Materials text
+%\end{materials}
+
+
+%% Optional Appendix or Appendices
+%% \appendix Appendix text...
+%% or, for appendix with title, use square brackets:
+%% \appendix[Appendix Title]
+
+\begin{acknowledgments}
+-- text of acknowledgments here, including grant info --
+\end{acknowledgments}
+
+%% PNAS does not support submission of supporting .tex files such as BibTeX.
+%% Instead all references must be included in the article .tex document. 
+%% If you currently use BibTeX, your bibliography is formed because the 
+%% command \verb+\bibliography{}+ brings the <filename>.bbl file into your
+%% .tex document. To conform to PNAS requirements, copy the reference listings
+%% from your .bbl file and add them to the article .tex file, using the
+%% bibliography environment described above.  
+
+%%  Contact pnas@nas.edu if you need assistance with your
+%%  bibliography.
+
+% Sample bibliography item in PNAS format:
+%% \bibitem{in-text reference} comma-separated author names up to 5,
+%% for more than 5 authors use first author last name et al. (year published)
+%% article title  {\it Journal Name} volume #: start page-end page.
+%% ie,
+% \bibitem{Neuhaus} Neuhaus J-M, Sitcher L, Meins F, Jr, Boller T (1991) 
+% A short C-terminal sequence is necessary and sufficient for the
+% targeting of chitinases to the plant vacuole. 
+% {\it Proc Natl Acad Sci USA} 88:10362-10366.
+
+
+%% Enter the largest bibliography number in the facing curly brackets
+%% following \begin{thebibliography}
+
+\begin{thebibliography}{}
+
+\end{thebibliography}
+
+\end{article}
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+%% Adding Figure and Table References
+%% Be sure to add figures and tables after \end{article}
+%% and before \end{document}
+
+%% For figures, put the caption below the illustration.
+%%
+%% \begin{figure}
+%% \caption{Almost Sharp Front}\label{afoto}
+%% \end{figure}
+
+%% For Tables, put caption above table
+%%
+%% Table caption should start with a capital letter, continue with lower case
+%% and not have a period at the end
+%% Using @{\vrule height ?? depth ?? width0pt} in the tabular preamble will
+%% keep that much space between every line in the table.
+
+%% \begin{table}
+%% \caption{Repeat length of longer allele by age of onset class}
+%% \begin{tabular}{@{\vrule height 10.5pt depth4pt  width0pt}lrcccc}
+%% table text
+%% \end{tabular}
+%% \end{table}
+
+%% For two column figures and tables, use the following:
+
+%% \begin{figure*}
+%% \caption{Almost Sharp Front}\label{afoto}
+%% \end{figure*}
+
+%% \begin{table*}
+%% \caption{Repeat length of longer allele by age of onset class}
+%% \begin{tabular}{ccc}
+%% table text
+%% \end{tabular}
+%% \end{table*}
+
+\end{document}
+




